2025-04-19T14:04:44 Running all scenarios... 2025-04-19T14:04:44 Setup file saved as tsubiology.cfg in results directory. 2025-04-19T14:04:44 Scenario: 2025-04-19T14:04:44 Camera network proxy for the camera found. Using proxy. 2025-04-19T14:04:44 Analyzing tsubiology Camera images: 2025-04-19T14:04:44 Establishing connection(s)... 2025-04-19T14:04:44 Looking for images... 2025-04-19T14:04:44 Crawling through 34 paths... 2025-04-19T14:04:45 73 possible files found. 2025-04-19T14:04:46 47 possible files found. 2025-04-19T14:04:48 201 possible files found. 2025-04-19T14:04:49 201 possible files found. 2025-04-19T14:04:49 201 possible files found. 2025-04-19T14:04:49 201 possible files found. 2025-04-19T14:04:49 155 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:50 47 possible files found. 2025-04-19T14:04:51 47 possible files found. 2025-04-19T14:04:51 97 possible files found. 2025-04-19T14:04:51 201 possible files found. 2025-04-19T14:04:51 89 possible files found. 2025-04-19T14:04:51 199 possible files found. 2025-04-19T14:04:51 199 possible files found. 2025-04-19T14:04:51 201 possible files found. 2025-04-19T14:04:51 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 205 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 199 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:52 201 possible files found. 2025-04-19T14:04:53 Listing images between dates 2025-03-19 - 2025-04-19 between times of the day 05:15:00 - 18:45:59... 2025-04-19T14:04:53 1043 images found. 2025-04-19T14:04:53 Running analysis 1: Plug-in: ml_ann_3_dense_reg_1... 2025-04-19T14:04:53 Reading results of image that are already processed... 2025-04-19T14:04:53 1043 images are already processed. 54 images will be processed. Results of 54 images which do not fit the temporal selection will be deleted. 2025-04-19T14:04:53 Checking existing images... 2025-04-19T14:04:53 54 images to be downloaded. 2025-04-19T14:04:53 Downloading/updating images... 2025-04-19T14:07:13 54 images were downloaded. 2025-04-19T14:07:13 Producing polygonic image mask... 2025-04-19T14:07:13 No polygonic masking selected. 2025-04-19T14:07:13 Number of unmasked pixels: 1244160 2025-04-19T14:07:13 Number of images:54 2025-04-19T14:07:13 Testing plugin for batch processing. 2025-04-19T14:07:13 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_list.csv 2025-04-19T14:07:13 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-19T14:07:18 Plugin output: Loading the model 2025-04-19T14:07:18 Plugin output: Reading batch list file 2025-04-19T14:07:18 Plugin output: 1 images to process 2025-04-19T14:07:18 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-19T14:07:18 Plugin output: Processing images and saving results 2025-04-19T14:07:18 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_results.csv 2025-04-19T14:07:19 2025-04-19T14:07:19 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_results.csv 2025-04-19T14:07:19 Test successful. Plugin supports batch processing. 2025-04-19T14:07:19 Creating image and mask list to submit to the plugin. 2025-04-19T14:07:19 List file saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_list.csv 2025-04-19T14:07:19 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-19T14:07:35 Plugin output: Loading the model 2025-04-19T14:07:35 Plugin output: Reading batch list file 2025-04-19T14:07:35 Plugin output: 54 images to process 2025-04-19T14:07:35 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-19T14:07:35 Plugin output: Processing images and saving results 2025-04-19T14:07:35 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_results.csv 2025-04-19T14:07:36 2025-04-19T14:07:36 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/7c084804-7062-4e4a-a6c6-1a6262f135ea/batch_results.csv 2025-04-19T14:07:36 Parsing results... 2025-04-19T14:07:36 Merging results... 2025-04-19T14:07:36 Storing results... 2025-04-19T14:07:36 Results are stored in /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A001R000.tsv, /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A001R000.tsvx. 2025-04-19T14:07:36 Results are stored in /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A001R000.csv. 2025-04-19T14:07:36 Running analysis 2: Plug-in: ml_cnn_large_kernel_1... 2025-04-19T14:07:36 Reading results of image that are already processed... 2025-04-19T14:07:36 1043 images are already processed. 54 images will be processed. Results of 54 images which do not fit the temporal selection will be deleted. 2025-04-19T14:07:36 Checking existing images... 2025-04-19T14:07:36 0 images to be downloaded. 2025-04-19T14:07:36 Producing polygonic image mask... 2025-04-19T14:07:36 No polygonic masking selected. 2025-04-19T14:07:36 Number of unmasked pixels: 1244160 2025-04-19T14:07:36 Number of images:54 2025-04-19T14:07:36 Testing plugin for batch processing. 2025-04-19T14:07:36 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_list.csv 2025-04-19T14:07:36 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-19T14:07:41 Plugin output: Loading the model 2025-04-19T14:07:41 Plugin output: Reading batch list file 2025-04-19T14:07:41 Plugin output: 1 images to process 2025-04-19T14:07:41 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-19T14:07:41 Plugin output: Processing images and saving results 2025-04-19T14:07:41 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_results.csv 2025-04-19T14:07:42 2025-04-19T14:07:42 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_results.csv 2025-04-19T14:07:42 Test successful. Plugin supports batch processing. 2025-04-19T14:07:42 Creating image and mask list to submit to the plugin. 2025-04-19T14:07:42 List file saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_list.csv 2025-04-19T14:07:42 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-19T14:07:57 Plugin output: Loading the model 2025-04-19T14:07:57 Plugin output: Reading batch list file 2025-04-19T14:07:57 Plugin output: 54 images to process 2025-04-19T14:07:57 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-19T14:07:57 Plugin output: Processing images and saving results 2025-04-19T14:07:57 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_results.csv 2025-04-19T14:07:58 2025-04-19T14:07:58 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/035f2279-f3ba-48e3-8b9c-65ba0c346427/batch_results.csv 2025-04-19T14:07:58 Parsing results... 2025-04-19T14:07:58 Merging results... 2025-04-19T14:07:58 Storing results... 2025-04-19T14:07:58 Results are stored in /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A002R000.tsv, /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A002R000.tsvx. 2025-04-19T14:07:58 Results are stored in /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/S001A002R000.csv. 2025-04-19T14:07:58 Scenario: 2025-04-19T14:07:58 Removing (54) downloaded images to save space. 2025-04-19T14:07:58 Camera network proxy for the camera found. Using proxy. 2025-04-19T14:07:58 Checking preview image for tsubiology... 2025-04-19T14:07:58 Updating preview image for camera: PHENOCAM - tsubiology 2025-04-19T14:07:58 Looking for the image for the Time of the image to be used as preview image provided by the setup file.... 2025-04-19T14:07:58 Establishing connection(s)... 2025-04-19T14:07:58 Looking for images... 2025-04-19T14:07:58 198 possible files found. 2025-04-19T14:07:58 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59... 2025-04-19T14:07:58 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59... 2025-04-19T14:07:58 0 images found. 2025-04-19T14:07:58 Checking existing images... 2025-04-19T14:07:58 0 images to be downloaded. 2025-04-19T14:07:58 Can not find the image for the Time of the image to be used as preview image provided by the setup file. It is removed from the setup. 2025-04-19T14:07:58 Looking for a suitable image... 2025-04-19T14:07:58 18.04.2025 2025-04-19T14:07:58 Establishing connection(s)... 2025-04-19T14:07:58 Looking for images... 2025-04-19T14:08:00 201 possible files found. 2025-04-19T14:08:00 Listing maximum 1 images between dates 2025-04-18 - 2025-04-18 between times of the day 09:00:00 - 18:59:59... 2025-04-19T14:08:00 Listing maximum 1 images between dates 2025-04-18 - 2025-04-18 between times of the day 09:00:00 - 18:59:59... 2025-04-19T14:08:00 1 images found. 2025-04-19T14:08:00 Checking existing images... 2025-04-19T14:08:00 1 images to be downloaded. 2025-04-19T14:08:00 Downloading/updating images... 2025-04-19T14:08:00 Image: 2025-04-19T14:08:00 1 images were downloaded. 2025-04-19T14:08:00 Preview image downloaded/updated for camera: PHENOCAM - tsubiology 2025-04-19T14:08:03 Preparing report... 2025-04-19T14:08:03 Result plots are saved as /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/results.html 2025-04-19T14:08:03 Report is saved as /var/www/html/data/operational/phenocam_ml_p3_nrt/tsubiology/report.html