2025-04-19T11:49:02 Running all scenarios...
2025-04-19T11:49:02 Setup file saved as marcell.cfg in results directory. 
2025-04-19T11:49:02 Scenario: 
2025-04-19T11:49:02 Camera network proxy for the camera found. Using proxy.
2025-04-19T11:49:02 Analyzing marcell Camera images:
2025-04-19T11:49:02 Establishing connection(s)...
2025-04-19T11:49:02 Looking for images...
2025-04-19T11:49:02 Crawling through 34 paths...
2025-04-19T11:49:03 73 possible files found.
2025-04-19T11:49:04 47 possible files found.
2025-04-19T11:49:06 125 possible files found.
2025-04-19T11:49:07 125 possible files found.
2025-04-19T11:49:07 125 possible files found.
2025-04-19T11:49:07 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:08 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:09 123 possible files found.
2025-04-19T11:49:09 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:10 125 possible files found.
2025-04-19T11:49:11 Listing images between dates 2025-03-19 - 2025-04-19 between times of the day 05:15:00 - 18:45:59...
2025-04-19T11:49:11 836 images found.
2025-04-19T11:49:11 Running analysis 1: Plug-in: ml_ann_3_dense_reg_1...
2025-04-19T11:49:11 Reading results of image that are already processed...
2025-04-19T11:49:11 836 images are already processed. 27 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted.
2025-04-19T11:49:11 Checking existing images...
2025-04-19T11:49:11 27 images to be downloaded.
2025-04-19T11:49:11 Downloading/updating images...
2025-04-19T11:50:22 27 images were downloaded.
2025-04-19T11:50:22 Producing polygonic image mask...
2025-04-19T11:50:22 No polygonic masking selected.
2025-04-19T11:50:22 Number of unmasked pixels: 1244160
2025-04-19T11:50:22 Number of images:27
2025-04-19T11:50:22 Testing plugin for batch processing.
2025-04-19T11:50:22 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_list.csv
2025-04-19T11:50:22 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-19T11:50:27 Plugin output: Loading the model

2025-04-19T11:50:27 Plugin output: Reading batch list file

2025-04-19T11:50:27 Plugin output: 1 images to process

2025-04-19T11:50:27 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-19T11:50:27 Plugin output: Processing images and saving results

2025-04-19T11:50:27 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_results.csv

2025-04-19T11:50:28 
2025-04-19T11:50:28 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_results.csv
2025-04-19T11:50:28 Test successful. Plugin supports batch processing.
2025-04-19T11:50:28 Creating image and mask list to submit to the plugin.
2025-04-19T11:50:28 List file saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_list.csv
2025-04-19T11:50:28 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-19T11:50:37 Plugin output: Loading the model

2025-04-19T11:50:37 Plugin output: Reading batch list file

2025-04-19T11:50:37 Plugin output: 27 images to process

2025-04-19T11:50:37 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-19T11:50:37 Plugin output: Processing images and saving results

2025-04-19T11:50:37 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_results.csv

2025-04-19T11:50:37 
2025-04-19T11:50:37 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/b54afad6-c73f-4ff8-8984-a4fd45e9a6ee/batch_results.csv
2025-04-19T11:50:37 Parsing results...
2025-04-19T11:50:37 Merging results...
2025-04-19T11:50:37 Storing results...
2025-04-19T11:50:37 Results are stored in /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A001R000.tsv, /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A001R000.tsvx.
2025-04-19T11:50:37 Results are stored in /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A001R000.csv.
2025-04-19T11:50:37 Running analysis 2: Plug-in: ml_cnn_large_kernel_1...
2025-04-19T11:50:37 Reading results of image that are already processed...
2025-04-19T11:50:38 836 images are already processed. 27 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted.
2025-04-19T11:50:38 Checking existing images...
2025-04-19T11:50:38 0 images to be downloaded.
2025-04-19T11:50:38 Producing polygonic image mask...
2025-04-19T11:50:38 No polygonic masking selected.
2025-04-19T11:50:38 Number of unmasked pixels: 1244160
2025-04-19T11:50:38 Number of images:27
2025-04-19T11:50:38 Testing plugin for batch processing.
2025-04-19T11:50:38 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_list.csv
2025-04-19T11:50:38 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-19T11:50:41 Plugin output: Loading the model

2025-04-19T11:50:41 Plugin output: Reading batch list file

2025-04-19T11:50:41 Plugin output: 1 images to process

2025-04-19T11:50:41 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-19T11:50:41 Plugin output: Processing images and saving results

2025-04-19T11:50:41 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_results.csv

2025-04-19T11:50:42 
2025-04-19T11:50:42 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_results.csv
2025-04-19T11:50:42 Test successful. Plugin supports batch processing.
2025-04-19T11:50:42 Creating image and mask list to submit to the plugin.
2025-04-19T11:50:42 List file saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_list.csv
2025-04-19T11:50:42 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-19T11:50:50 Plugin output: Loading the model

2025-04-19T11:50:50 Plugin output: Reading batch list file

2025-04-19T11:50:50 Plugin output: 27 images to process

2025-04-19T11:50:50 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-19T11:50:50 Plugin output: Processing images and saving results

2025-04-19T11:50:50 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_results.csv

2025-04-19T11:50:51 
2025-04-19T11:50:51 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/c65d7f3d-a4f1-4b16-b696-62e267084f4e/batch_results.csv
2025-04-19T11:50:51 Parsing results...
2025-04-19T11:50:51 Merging results...
2025-04-19T11:50:51 Storing results...
2025-04-19T11:50:51 Results are stored in /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A002R000.tsv, /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A002R000.tsvx.
2025-04-19T11:50:51 Results are stored in /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/S001A002R000.csv.
2025-04-19T11:50:51 Scenario: 
2025-04-19T11:50:51 Removing (27) downloaded images to save space.
2025-04-19T11:50:51 Camera network proxy for the camera found. Using proxy.
2025-04-19T11:50:51 Checking preview image for marcell...
2025-04-19T11:50:51 Updating preview image for camera: PHENOCAM - marcell
2025-04-19T11:50:51 Looking for the image for the Time of the image to be used as preview image provided by the setup file....
2025-04-19T11:50:51 Establishing connection(s)...
2025-04-19T11:50:51 Looking for images...
2025-04-19T11:50:51 45 possible files found.
2025-04-19T11:50:51 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-04-19T11:50:51 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-04-19T11:50:51 0 images found.
2025-04-19T11:50:51 Checking existing images...
2025-04-19T11:50:51 0 images to be downloaded.
2025-04-19T11:50:51 Can not find the image for the Time of the image to be used as preview image provided by the setup file. It is removed from the setup.
2025-04-19T11:50:51 Looking for a suitable image...
2025-04-19T11:50:51 18.04.2025
2025-04-19T11:50:51 Establishing connection(s)...
2025-04-19T11:50:51 Looking for images...
2025-04-19T11:50:52 125 possible files found.
2025-04-19T11:50:52 Listing maximum 1 images between dates 2025-04-18 - 2025-04-18 between times of the day 09:00:00 - 18:59:59...
2025-04-19T11:50:52 Listing maximum 1 images between dates 2025-04-18 - 2025-04-18 between times of the day 09:00:00 - 18:59:59...
2025-04-19T11:50:52 1 images found.
2025-04-19T11:50:52 Checking existing images...
2025-04-19T11:50:52 1 images to be downloaded.
2025-04-19T11:50:52 Downloading/updating images...
2025-04-19T11:50:52 Image: 
2025-04-19T11:50:52 1 images were downloaded.
2025-04-19T11:50:52 Preview image downloaded/updated for camera: PHENOCAM - marcell
2025-04-19T11:50:56 Preparing report...
2025-04-19T11:50:56 Result plots are saved as /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/results.html
2025-04-19T11:50:56 Report is saved as /var/www/html/data/operational/phenocam_ml_p2_nrt/marcell/report.html